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Molecular Cloning Services
Molecular Cloning Services

Molecular Cloning Services

BrainVTA offers comprehensive cloning services to create custom DNA constructs with 100% accuracy, providing fast delivery, various vector and marker options, and cost-effective solutions to save researchers time, effort, and frustration. Simply provide your project information, and we will deliver ready-to-use products for your research.

Technical Workflow

Technical Workflow

Step1. How to choose a suitable vector backbone?

Each viral delivery system has different characteristics, so it is important for you to choose the right vector in your research. Below is a quick comparison for some commonly used viral delivery vectors.

Viral Vector AAV LV Ad
Genome ssDNA ssRNA (+) dsDNA
Coat Naked Enveloped Naked
Type Non-integrating Integrating Non-integrating
Infection Dividing and non-dividing cells Dividing and non-dividing cells Dividing and non-dividing cells
Packaging Capacity 4.9kb 6kb 7.5kb
Expression Potentially long-lasting Long-lasting Transient
Immunogenicity Very Low Low High
Transduction Efficiency Moderate Moderate High
Biosafety BSL-1 BSL-2 BSL-2

Step2. How to choose the promoter

BrainVTA offers various tissue-specific promoters. Listed below are the most commonly chosen promoters. Don' see the promoter of interest, please contact us. There are many other options in our library, meanwhile, custom promoter and serotype service are avaliable.

Organ Serotype Promoter
Nervous System Cross BBB: AAV-PHP.eB, AAV-B10 Brain: AAV1, AAV2, AAV5, AAV8, AAV9 PNS: AAV-PHP.S, AAV9, AAV-MaCPNS1/2 Retrograde labeling: AAV2/retro, AAV11 Anterograde Trans-synaptic: AAV1 hSyn, CaMKIlα, mecp2, c-fos, TH, GFAP, GfaABC1D, CX3CR1, Cd68, L7/pcp2, MPZ, MBP,NG2, ChAT, mDIX, PV, NPY, SST(som), VGAT1/2, VGLUT2, DBH
Eye Eye: AAV2, AAV5, AAV8, AAV9 Retina: AAV5, AAV8, AAV-Anc8OL65, AAV9, AAV-2.NN Retinal Müller cells: AAV-ShH10, AAV-ShH10 (Y445F) CAG, CAR, Grm6
Heart AAV9 cTnT, CS-CRM4-αMHC, CMV
Muscles Muscle: AAV1, AAV6, AAV7, AAV8, AAV9, MyoAAV Smooth muscle: AAV1, AAV2, AAV5, AAV9 Skeletal muscle: AAV1, AAV-Anc80L65, AAV9 tMCK, MHCK7, CAG
Liver AAV2, AAV5, AAV7, AAV8, AAV-DJ, AAV-Rh10, AAV-Anc80L65 TBG, TTR, Efl1α
Lung AAV6, AAV-6.2, AAV-6.2FF, AAV9, AAV-DJ, AAV-Rh10 CMV, CAG
Kidney AAV2, AAV8, AAV-DJ CMV, CAG

Step 3. Add the GOI, Tag, reporter, linker

BrainVTA have an extensive collection of commonly used element (tags, reporters, linkers,ect) and gene in neurosciences as well as human and murine genes, so it is very easily to recombine them into viral vectors. If your GOI is out of our gene pool, BrainVTA can offer gene synthesis, mutagenesis, shRNA and CRISPR-Cas9 services to customize your order. Or if you have some materials in hand, you can send it to us, we do subclone into a custom viral vector.

Genetic Element Available Options
Tags 6xHis, 3XFlag, HA, Myc
Localization H2B, NLS, soma, NES, LCK, mito, axon
Linker 2A, IRES
Reporters EGFP, mCherry, RFP, tagBFP, CFP, mCelulean, mCitrine, dsRed, Luciferase, etc

Step 4 Package into Virus Particle

If you would like your custom vector packaged into viral particles, please specify when you request a quote. Please visit our AAV, adenovirus, and lentivirus viral vector packaging services page for more information!

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FAQs

  • Which bacterial strain does BrainVTA use for cloning its vectors? What bacterial strains can I use for propagating my plasmid obtained from BrainVTA?
    We commonly used bacterial hosts strains such as DH5α and Stbl3.
  • Are there any limitations to which ORFs can be shuttled?
    If you want to generate viral particles, you must not exceed the packaging capacity of the virus. Please note that the packaging capacity refers to the total insert size between and including the ITRs or LTRs.AAV cloning capacity: 4.7 kb. Adenovirus cloning capacity: 7.5 kb, Lentivirus cloning capacity: 6 kb

References

  • Chen ZP, Wang S, Zhao X, Fang W, Wang Z, Ye H, Wang MJ, Ke L, Huang T, Lv P, Jiang X, Zhang Q, Li L, Xie ST, Zhu JN, Hang C, Chen D, Liu X, Yan C. Lipid-accumulated reactive astrocytes promote disease progression in epilepsy. https://www.nature.com/articles/s41593-023-01288-6
  • de León Reyes NS, Sierra Díaz P, Nogueira R, Ruiz-Pino A, Nomura Y, de Solis CA, Schulkin J, Asok A, Leroy F. Corticotropin-releasing hormone signaling from prefrontal cortex to lateral septum suppresses interaction with familiar mice. Cell. 2023 Sep 14;186(19):4152-4171.e31. doi: 10.1016/j.cell.2023.08.010. Epub 2023 Sep 4. PMID: 37669667; PMCID: PMC7615103.
  • Fan BF, Hao B, Dai YD, Xue L, Shi YW, Liu L, Xuan SM, Yang N, Wang XG, Zhao H. Deficiency of Tet3 in nucleus accumbens enhances fear generalization and anxiety-like behaviors in mice. https://onlinelibrary.wiley.com/doi/10.1111/bpa.13080

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